RiPPMiner
A Bioinformatics Resource for Deciphering Chemical Structures of RiPPs
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RiPP Class Prediction
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Lanthipeptide
Bottromycin
Cyanobactin
Glycocin
Lassopeptide
Linaridin
Linearazol
Microcin
Sactipeptide
Thiopeptide
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Bacterial_head_to_tail_cyclized
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Name
Cypemycin
Class
Linaridin
Modification System
LinL
Producer Organism
Streptomyces sp.
Uniprot ID
Sequence
MRSEMTLTSTNSAEALAAQDFANTVLSAAAPGFHADCETPAMATPATPTVAQFVIQGSTICLVC
Leader peptide
MRSEMTLTSTNSAEALAAQDFANTVLSAAAPGFHADCETPAM
Core Peptide
ATPATPTVAQFVIQGSTICLVC
Modified Residues
1
N,N-dimethylalanine
2
(E)-2,3-didehydrobutyrine
5
(E)-2,3-didehydrobutyrine
7
(E)-2,3-didehydrobutyrine
13
L-allo-isoleucine
17
(E)-2,3-didehydrobutyrine
18
L-allo-isoleucine
Cross-links
19--22
S-(2-aminovinyl)-D-cysteine (Cys-Cys)
PDB ID
CLUSTER ID
Literature REF