RiPPMiner
A Bioinformatics Resource for Deciphering Chemical Structures of RiPPs
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RiPP Class Prediction
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DATABASE
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Lanthipeptide
Bottromycin
Cyanobactin
Glycocin
Lassopeptide
Linaridin
Linearazol
Microcin
Sactipeptide
Thiopeptide
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Bacterial_head_to_tail_cyclized
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Name
TP-1161
Class
Thiopeptide
Modification System
Producer Organism
Nocardiopsis sp. TFS65-07
Uniprot ID
Sequence
MNKDIDLSAIEISDLISETEQSDDALSQVMAASCTTTGCACSSSSSST
Leader peptide
MNKDIDLSAIEISDLISETEQSDDALSQVMAA
Core Peptide
SCTTTGCACSSSSSST
Modified Residues
2
(Thiazole)
7
(Thiazole)
9
(Thiazole)
5
(me-Oxazole)
12
(Oxazole)
4
2,3-didehydrobutyrine
10
2,3-didehydroalanine
11
2,3-didehydroalanine
14
2,3-didehydroalanine
15
2,3-didehydroalanine
15
-NCC(C=O)C
Cross-links
1--13
Pyridine Ring
PDB ID
CLUSTER ID
Literature REF
CLUSTER
Gene Name
Gene Description
Protein ID
Domain Analysis
Uniprot/PDB
tpa1
Tpa1
tpa2
Tpa2
tpa3
Tpa3
tpa4
Tpa4
tpa5
Tpa5
tpa6
Tpa6
tpa7
hypothetical protein
tpaA
TpaA
tpaB
hypothetical protein
tpaC
TpaC
tpaD
TpaD
tpaE
TpaE
tpaF
TpaF
tpaG
hypothetical protein
tpaH
TpaH
tpaI
TpaI
tpaJ
TpaJ
tpaX
TpaX
tpaK
TpaK
tpaL
TpaL
tpa8
Tpa8
tpa9
Tpa9
tpa10
Tpa10
tpa11
Tpa11