RiPPMiner
A Bioinformatics Resource for Deciphering Chemical Structures of RiPPs
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RiPP Class Prediction
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Lanthipeptide
Bottromycin
Cyanobactin
Glycocin
Lassopeptide
Linaridin
Linearazol
Microcin
Sactipeptide
Thiopeptide
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Name
Thiomuracin C
Class
Thiopeptide
Modification System
Producer Organism
Nonomuraea sp. Bp3714-39
Uniprot ID
Sequence
SCNCFCYICCSCSSA
Leader peptide
Core Peptide
1-15
SCNCFCYICCSCSSA
Modified Residues
2
(Thiazole)
4
(Thiazole)
6
(Thiazole)
9
(Thiazole)
10
(Thiazole)
12
(Thiazole)
13
2,3-didehydroalanine
2
3-didehydroalanine,2,3-didehydroalanine
14
2,3-didehydroalanine
5
beta-OH-Phe
8
Ile
Cross-links
1--11
Pyridine Ring
PDB ID
CLUSTER ID
Literature REF
CLUSTER
Gene Name
Gene Description
Protein ID
Domain Analysis
Uniprot/PDB
tpdI
coproporphyrinogen III oxidase
tpdJ1
cytochrome P450 monooxygenase
tpdJ2
cytochrome P450 monooxygenase
tpdR
TetR transcriptional regulator
tpdA
thiomuracin prepropeptide
tpdB
dehydratase
tpdC
dehydratase
tpdD
hypothetical protein
tpdE
dehydrogenase
tpdF
hypothetical protein
tpdG
cyclodehydratase
tpdH
peptidase