RiPPMiner
A Bioinformatics Resource for Deciphering Chemical Structures of RiPPs
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RiPP Class Prediction
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DATABASE
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Lanthipeptide
Bottromycin
Cyanobactin
Glycocin
Lassopeptide
Linaridin
Linearazol
Microcin
Sactipeptide
Thiopeptide
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Auto Inducing Peptides
Bacterial_head_to_tail_cyclized
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Name
siomycin B
Class
Thiopeptide
Modification System
Producer Organism
Streptomyces sioyaensis ATCC 13989
Uniprot ID
Sequence
VSSASCTTCICTCSC
Leader peptide
Core Peptide
1-15
VSSASCTTCICTCSC
Modified Residues
6
(Thiazole)
9
(Thiazole)
11
(Thiazole)
13
(Thiazole)
15
(Thiazole)
2
2,3-didehydroalanine
3
2,3-didehydroalanine
8
2,3-didehydrobutyrine
10
dihydroxy-Ile
3
dihydroxy-Ile
4
dihydroxy-Ile
12
val
1-12
(quinalic-acid)
15
NH2
Cross-links
5--14
Piperidine Ring
PDB ID
CLUSTER ID
Literature REF
CLUSTER
Gene Name
Gene Description
Protein ID
Domain Analysis
Uniprot/PDB
sio1
Sio1
sio2
Sio2
sio3
Sio3
sio4
Sio4
sio5
Sio5
sio6
Sio6
sioA
SioA
sioB
SioB
sioC
SioC
sioD
SioD
sioE
SioE
sioF
SioF
sioG
SioG
sioH
SioH
sioI
SioI
sioJ
SioJ
sioK
SioK
sioL
SioL
sioM
SioM
sioN
SioN
sioO
SioO
sioP
SioP
sioQ
SioQ
sioR
SioR
sioS
SioS
sioT
SioT
sioU
SioU