logoNII

      RiPPMiner-Genome: A web resource for automated prediction of cross-linked chemical structures of RiPPs
This website is free and open to all users and there is no login requirement



Keyword Search:  

Subtilin
NameSubtilin
ClasslanthipeptideA
Modification SystemLanBC
Producer OrganismBacillus subtilis
Uniprot IDuniprot
SequenceMSKFDDFDLDVVKVSKQDSKITPQWKSESLCTPGCVTGALQTCFLQTLTCNCKISK
Leader peptideMSKFDDFDLDVVKVSKQDSKITPQ
Core PeptideWKSESLCTPGCVTGALQTCFLQTLTCNCKISK
Modified Residues
1 N2-succinyltryptophan
5 2,3-didehydroalanine (Ser)
18 (Z)-2,3-didehydrobutyrine
31 2,3-didehydroalanine (Ser)
Cross-links
3--7 Lanthionine (Ser-Cys)
8--11 Beta-methyllanthionine (Thr-Cys)
13--19 Beta-methyllanthionine (Thr-Cys)
23--26 Beta-methyllanthionine (Thr-Cys)
25--28 Beta-methyllanthionine (Thr-Cys)
PDB ID
CLUSTER IDncbi
Literature REFpubmed pubmed pubmed 


CLUSTER


Gene Name
Gene Description
Protein ID
Domain Analysis
Uniprot/PDB
spaB
SpaB
ncbi
spaT
SpaT
ncbi
spaC
SpaC
ncbi
spaS
SpaS lantibiotic
ncbi
spai
SpaI immunity
ncbi
spaF
SpaF immunity
ncbi
spaE
SpaE immunity
ncbi
spaG
SpaG immunity
ncbi
spaR
SpaR response regulator
ncbi
spaK
SpaK kinase
ncbi
Orf1
ncbi
Orf2
ncbi
yvan
Yvan
ncbi